Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 AC092171.3-201ENST00000610122 2651 ntBASIC19.67■□□□□ 0.74
CBX8Q9HC52 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 FITM1-202ENST00000559294 800 ntBASIC19.67■□□□□ 0.74
CBX8Q9HC52 AL157888.1-201ENST00000631930 593 ntBASIC19.67■□□□□ 0.74
CBX8Q9HC52 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 BX276092.7-203ENST00000637198 1536 ntBASIC19.66■□□□□ 0.74
CBX8Q9HC52 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 AC008741.2-201ENST00000612792 3115 ntBASIC19.66■□□□□ 0.74
CBX8Q9HC52 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX8Q9HC52 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.66■□□□□ 0.74
CBX8Q9HC52 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 AC078925.2-201ENST00000624013 1973 ntBASIC19.65■□□□□ 0.74
CBX8Q9HC52 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 AC092865.7-201ENST00000641832 219 ntBASIC19.65■□□□□ 0.74
CBX8Q9HC52 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CBX8Q9HC52 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX8Q9HC52 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX8Q9HC52 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX8Q9HC52 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CBX8Q9HC52 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX8Q9HC52 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CBX8Q9HC52 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CBX8Q9HC52 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 PRORSD1P-201ENST00000295112 541 ntBASIC19.64■□□□□ 0.73
CBX8Q9HC52 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms