Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 NME2P1-201ENST00000426182 414 ntBASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC026150.2-201ENST00000564693 1156 ntBASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 RARRES2P8-201ENST00000566335 367 ntBASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC116407.2-201ENST00000613639 860 ntBASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AL645728.2-201ENST00000641974 660 ntBASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
C11orf49Q9H6J7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 AC100803.2-201ENST00000562459 1963 ntBASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 AKAP8P1-201ENST00000434743 1349 ntBASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 AC129492.6-201ENST00000611383 1305 ntBASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
C11orf49Q9H6J7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 SPCS2P4-201ENST00000436160 681 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 AC097493.3-201ENST00000509725 367 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 IGHV3-62-201ENST00000520057 340 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 AC069120.2-201ENST00000524091 540 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 AL596325.1-201ENST00000563991 1082 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 AL662799.1-202ENST00000614205 422 ntBASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf49Q9H6J7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.14■□□□□ 0.66
C11orf49Q9H6J7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf49Q9H6J7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms