Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AL671277.1-201ENST00000429656 993 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SPDYE11-202ENST00000450699 704 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 RN7SL589P-201ENST00000481268 310 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AL512356.2-201ENST00000546955 174 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SPDYE9P-201ENST00000570642 692 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SPDYE10P-202ENST00000612005 668 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 SPDYE8P-202ENST00000612377 668 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AL645728.2-201ENST00000641974 660 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 AC093214.1-201ENST00000511688 1107 ntBASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CNTNAP4Q9C0A0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 AC244107.1-201ENST00000442033 332 ntBASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 AC069335.1-201ENST00000489972 472 ntBASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 AC079140.1-201ENST00000508039 487 ntBASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CNTNAP4Q9C0A0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CNTNAP4Q9C0A0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.95■■□□□ 1.11
CNTNAP4Q9C0A0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
CNTNAP4Q9C0A0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CNTNAP4Q9C0A0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 GPS2P2-201ENST00000430745 888 ntBASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 AC005237.2-201ENST00000434368 219 ntBASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 AC190387.1-201ENST00000551683 408 ntBASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 AP001059.3-201ENST00000619053 235 ntBASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
CNTNAP4Q9C0A0 KRT18P55-202ENST00000578578 1546 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms