Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 AC135050.7-201ENST00000624508 2218 ntBASIC18.33■□□□□ 0.53
LRRC3Q9BY71 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC3Q9BY71 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.32■□□□□ 0.52
LRRC3Q9BY71 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 AC090164.3-201ENST00000610780 2143 ntBASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC3Q9BY71 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 AC023274.1-201ENST00000418278 595 ntBASIC18.31■□□□□ 0.52
LRRC3Q9BY71 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 IGHV3-65-201ENST00000523210 341 ntBASIC18.31■□□□□ 0.52
LRRC3Q9BY71 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 AL390961.4-201ENST00000623958 2535 ntBASIC18.31■□□□□ 0.52
LRRC3Q9BY71 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC3Q9BY71 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 STK19B-204ENST00000512515 211 ntBASIC18.3■□□□□ 0.52
LRRC3Q9BY71 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC3Q9BY71 AC008667.4-201ENST00000607370 168 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms