Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP4Q99569 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PKP4Q99569 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PKP4Q99569 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP4Q99569 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PKP4Q99569 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.15■□□□□ 0.34
PKP4Q99569 RCN1P2-201ENST00000398357 915 ntBASIC17.15■□□□□ 0.34
PKP4Q99569 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.15■□□□□ 0.34
PKP4Q99569 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP4Q99569 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.15■□□□□ 0.34
PKP4Q99569 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.15■□□□□ 0.34
PKP4Q99569 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.15■□□□□ 0.34
PKP4Q99569 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PKP4Q99569 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PKP4Q99569 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PKP4Q99569 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PKP4Q99569 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 POM121L3P-201ENST00000419331 1163 ntBASIC17.14■□□□□ 0.33
PKP4Q99569 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.14■□□□□ 0.33
PKP4Q99569 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.14■□□□□ 0.33
PKP4Q99569 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 AC019129.2-201ENST00000609837 1235 ntBASIC17.14■□□□□ 0.33
PKP4Q99569 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PKP4Q99569 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PKP4Q99569 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PKP4Q99569 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP4Q99569 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PKP4Q99569 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.13■□□□□ 0.33
PKP4Q99569 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.13■□□□□ 0.33
PKP4Q99569 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.13■□□□□ 0.33
PKP4Q99569 AC109462.3-201ENST00000573934 613 ntBASIC17.13■□□□□ 0.33
PKP4Q99569 MIR3652-201ENST00000579335 131 ntBASIC17.13■□□□□ 0.33
PKP4Q99569 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.13■□□□□ 0.33
PKP4Q99569 AC114341.1-201ENST00000618070 349 ntBASIC17.13■□□□□ 0.33
PKP4Q99569 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.13■□□□□ 0.33
PKP4Q99569 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.13■□□□□ 0.33
PKP4Q99569 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.13■□□□□ 0.33
PKP4Q99569 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 INTS4P1-201ENST00000438455 1935 ntBASIC17.13■□□□□ 0.33
PKP4Q99569 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP4Q99569 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP4Q99569 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.12■□□□□ 0.33
PKP4Q99569 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP4Q99569 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
PKP4Q99569 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PKP4Q99569 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms