Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
NBPF4Q96M43 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
NBPF4Q96M43 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.04■■□□□ 1.28
NBPF4Q96M43 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.04■■□□□ 1.28
NBPF4Q96M43 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NBPF4Q96M43 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.04■■□□□ 1.28
NBPF4Q96M43 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC023141.13-201ENST00000604991 943 ntBASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC091812.2-201ENST00000619081 385 ntBASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC092902.6-201ENST00000641783 218 ntBASIC23.03■■□□□ 1.28
NBPF4Q96M43 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AC104581.1-202ENST00000635932 2618 ntBASIC23.03■■□□□ 1.28
NBPF4Q96M43 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF4Q96M43 AL135999.2-201ENST00000622438 1686 ntBASIC23.03■■□□□ 1.28
NBPF4Q96M43 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 AL139400.1-201ENST00000366220 510 ntBASIC23.02■■□□□ 1.28
NBPF4Q96M43 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 AL645939.2-201ENST00000427340 991 ntBASIC23.02■■□□□ 1.28
NBPF4Q96M43 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 CXCL1P1-201ENST00000502804 216 ntBASIC23.02■■□□□ 1.28
NBPF4Q96M43 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 FLJ13224-201ENST00000313737 1514 ntBASIC23.02■■□□□ 1.28
NBPF4Q96M43 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF4Q96M43 AC090164.3-201ENST00000610780 2143 ntBASIC23.02■■□□□ 1.28
NBPF4Q96M43 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC23.02■■□□□ 1.28
NBPF4Q96M43 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 FAM185BP-201ENST00000443595 716 ntBASIC23.01■■□□□ 1.27
NBPF4Q96M43 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 AC007064.4-201ENST00000637740 555 ntBASIC23.01■■□□□ 1.27
NBPF4Q96M43 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF4Q96M43 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF4Q96M43 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF4Q96M43 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF4Q96M43 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF4Q96M43 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF4Q96M43 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF4Q96M43 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms