Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 ID1-201ENST00000376105 1233 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC006058.3-201ENST00000606217 1069 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC116407.2-201ENST00000613639 860 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC112497.1-201ENST00000624824 639 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 AC092171.3-201ENST00000610122 2651 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 LINC00167-201ENST00000530583 1419 ntBASIC13.47□□□□□ -0.25
LINC00479Q96M42 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00479Q96M42 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00479Q96M42 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 AC132872.4-202ENST00000622924 2756 ntBASIC13.46□□□□□ -0.25
LINC00479Q96M42 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 CRYGFP-201ENST00000418459 633 ntBASIC13.46□□□□□ -0.25
LINC00479Q96M42 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 AP003041.3-201ENST00000527151 707 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms