Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP6Q96FZ7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 AC142381.4-202ENST00000563973 229 ntBASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 AL359736.2-201ENST00000621992 437 ntBASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP6Q96FZ7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 KRT16P1-201ENST00000399124 1418 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC016396.2-201ENST00000562575 1417 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC132938.6-201ENST00000623828 1655 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC116353.5-201ENST00000638148 1699 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 KSR1P1-201ENST00000446298 240 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 FER1L4-210ENST00000615531 5998 ntBASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP6Q96FZ7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms