Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH3KBP1Q96B97 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH3KBP1Q96B97 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH3KBP1Q96B97 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SH3KBP1Q96B97 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH3KBP1Q96B97 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SAPCD2P3-201ENST00000455031 850 ntBASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AL160237.2-201ENST00000556165 472 ntBASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AC132938.6-201ENST00000623828 1655 ntBASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.45■□□□□ 0.38
SH3KBP1Q96B97 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms