Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 AC010947.1-201ENST00000623454 693 ntBASIC16.95■□□□□ 0.3
VPS33AQ96AX1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 ECEL1P2-202ENST00000465689 757 ntBASIC16.94■□□□□ 0.3
VPS33AQ96AX1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 NEK4P2-201ENST00000580004 1012 ntBASIC16.94■□□□□ 0.3
VPS33AQ96AX1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 AL118508.1-201ENST00000613502 2345 ntBASIC16.94■□□□□ 0.3
VPS33AQ96AX1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS33AQ96AX1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 DDX43P3-201ENST00000441064 443 ntBASIC16.93■□□□□ 0.3
VPS33AQ96AX1 AC113404.2-201ENST00000507884 177 ntBASIC16.93■□□□□ 0.3
VPS33AQ96AX1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VPS33AQ96AX1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 FER1L4-210ENST00000615531 5998 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms