Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 AC018470.1-201ENST00000624790 3129 ntBASIC15.83■□□□□ 0.13
CPNE4Q96A23 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
CPNE4Q96A23 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE4Q96A23 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.83■□□□□ 0.13
CPNE4Q96A23 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE4Q96A23 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CPNE4Q96A23 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE4Q96A23 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE4Q96A23 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE4Q96A23 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
CPNE4Q96A23 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CPNE4Q96A23 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE4Q96A23 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE4Q96A23 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AC004870.1-201ENST00000315132 882 ntBASIC15.82■□□□□ 0.12
CPNE4Q96A23 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE4Q96A23 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE4Q96A23 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE4Q96A23 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms