Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR1Q969H4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR1Q969H4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR1Q969H4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.39■■□□□ 1.02
CNKSR1Q969H4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR1Q969H4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNKSR1Q969H4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 AC063926.2-201ENST00000623766 1308 ntBASIC21.39■■□□□ 1.01
CNKSR1Q969H4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 AL035252.4-201ENST00000624174 288 ntBASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.39■■□□□ 1.01
CNKSR1Q969H4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC005034.1-201ENST00000426657 489 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 BASP1P1-201ENST00000430708 665 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC055876.3-201ENST00000431496 288 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC069335.1-201ENST00000489972 472 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 KRT8P48-201ENST00000515599 1220 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC099522.2-201ENST00000607001 744 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC138649.4-201ENST00000612222 287 ntBASIC21.38■■□□□ 1.01
CNKSR1Q969H4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNKSR1Q969H4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC129492.6-201ENST00000611383 1305 ntBASIC21.37■■□□□ 1.01
CNKSR1Q969H4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AL512356.2-201ENST00000546955 174 ntBASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC051619.7-201ENST00000568314 623 ntBASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNKSR1Q969H4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 AL592309.1-201ENST00000443127 649 ntBASIC21.36■■□□□ 1.01
CNKSR1Q969H4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNKSR1Q969H4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms