Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 AC009154.2-201ENST00000621177 724 ntBASIC15.84■□□□□ 0.13
PTP4A1Q93096 AC011558.1-201ENST00000623459 338 ntBASIC15.84■□□□□ 0.13
PTP4A1Q93096 AL023973.1-201ENST00000624619 620 ntBASIC15.84■□□□□ 0.13
PTP4A1Q93096 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTP4A1Q93096 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PTP4A1Q93096 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTP4A1Q93096 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
PTP4A1Q93096 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTP4A1Q93096 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTP4A1Q93096 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTP4A1Q93096 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.83■□□□□ 0.13
PTP4A1Q93096 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.83■□□□□ 0.13
PTP4A1Q93096 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTP4A1Q93096 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
PTP4A1Q93096 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 AC005104.2-201ENST00000427818 678 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 KRT18P57-201ENST00000443599 1254 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 YBX1P2-201ENST00000489612 999 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 AC112698.1-201ENST00000510299 916 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 AC004263.2-201ENST00000617183 678 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 BX276092.7-203ENST00000637198 1536 ntBASIC15.83■□□□□ 0.12
PTP4A1Q93096 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTP4A1Q93096 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.83■□□□□ 0.12
PTP4A1Q93096 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 AGGF1P2-201ENST00000426656 2106 ntBASIC15.82■□□□□ 0.12
PTP4A1Q93096 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 TSPY5P-201ENST00000426936 936 ntBASIC15.82■□□□□ 0.12
PTP4A1Q93096 AC117947.1-201ENST00000427448 529 ntBASIC15.82■□□□□ 0.12
PTP4A1Q93096 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTP4A1Q93096 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTP4A1Q93096 AL118508.1-201ENST00000613502 2345 ntBASIC15.82■□□□□ 0.12
PTP4A1Q93096 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms