Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRQ92834 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RPGRQ92834 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRQ92834 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRQ92834 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RPGRQ92834 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.58■■□□□ 1.04
RPGRQ92834 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RPGRQ92834 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.58■■□□□ 1.04
RPGRQ92834 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRQ92834 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRQ92834 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.58■■□□□ 1.04
RPGRQ92834 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRQ92834 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRQ92834 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.58■■□□□ 1.04
RPGRQ92834 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRQ92834 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPGRQ92834 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRQ92834 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRQ92834 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.57■■□□□ 1.04
RPGRQ92834 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 AC004835.2-201ENST00000603762 682 ntBASIC21.57■■□□□ 1.04
RPGRQ92834 AC068137.2-201ENST00000605408 478 ntBASIC21.57■■□□□ 1.04
RPGRQ92834 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RPGRQ92834 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPGRQ92834 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRQ92834 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRQ92834 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRQ92834 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.56■■□□□ 1.04
RPGRQ92834 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 AL139400.1-201ENST00000366220 510 ntBASIC21.56■■□□□ 1.04
RPGRQ92834 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.56■■□□□ 1.04
RPGRQ92834 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.56■■□□□ 1.04
RPGRQ92834 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 AC092902.6-201ENST00000641783 218 ntBASIC21.56■■□□□ 1.04
RPGRQ92834 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.56■■□□□ 1.04
RPGRQ92834 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRQ92834 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRQ92834 WIZP1-201ENST00000531444 2299 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RPGRQ92834 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.55■■□□□ 1.04
RPGRQ92834 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 ACTG1P4-201ENST00000425123 1122 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.55■■□□□ 1.04
RPGRQ92834 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.55■■□□□ 1.04
RPGRQ92834 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.55■■□□□ 1.04
RPGRQ92834 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.55■■□□□ 1.04
RPGRQ92834 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.55■■□□□ 1.04
RPGRQ92834 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.55■■□□□ 1.04
RPGRQ92834 AC004449.1-201ENST00000564240 433 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.55■■□□□ 1.04
RPGRQ92834 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.55■■□□□ 1.04
RPGRQ92834 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.55■■□□□ 1.04
RPGRQ92834 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.55■■□□□ 1.04
RPGRQ92834 AL513210.1-201ENST00000629608 234 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
RPGRQ92834 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRQ92834 AL590787.1-201ENST00000568856 1315 ntBASIC21.55■■□□□ 1.04
RPGRQ92834 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms