Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 AC122714.2-201ENST00000502787 707 ntBASIC18.73■□□□□ 0.59
DDX1Q92499 AC079776.4-201ENST00000511039 504 ntBASIC18.73■□□□□ 0.59
DDX1Q92499 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX1Q92499 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 KRT18P1-202ENST00000452408 1331 ntBASIC18.73■□□□□ 0.59
DDX1Q92499 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX1Q92499 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX1Q92499 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX1Q92499 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX1Q92499 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX1Q92499 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX1Q92499 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
DDX1Q92499 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX1Q92499 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX1Q92499 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
DDX1Q92499 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX1Q92499 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.71■□□□□ 0.59
DDX1Q92499 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX1Q92499 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DDX1Q92499 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
DDX1Q92499 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
DDX1Q92499 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.71■□□□□ 0.59
DDX1Q92499 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 AP002414.4-201ENST00000589764 1148 ntBASIC18.71■□□□□ 0.59
DDX1Q92499 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX1Q92499 BX640515.1-201ENST00000617215 977 ntBASIC18.71■□□□□ 0.59
DDX1Q92499 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DDX1Q92499 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX1Q92499 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX1Q92499 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
DDX1Q92499 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
DDX1Q92499 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX1Q92499 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX1Q92499 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX1Q92499 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DDX1Q92499 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DDX1Q92499 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
DDX1Q92499 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
DDX1Q92499 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX1Q92499 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX1Q92499 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX1Q92499 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms