Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 UGT1A2P-201ENST00000454886 866 ntBASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HERVK_113Q902F9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HERVK_113Q902F9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.77■□□□□ 0.59
HERVK_113Q902F9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.77■□□□□ 0.59
HERVK_113Q902F9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
HERVK_113Q902F9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 KRT18P32-201ENST00000424695 1287 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 FAM58DP-201ENST00000428076 619 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC140658.5-201ENST00000438532 169 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 RN7SL589P-201ENST00000481268 310 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC002558.1-201ENST00000488906 803 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC079140.1-201ENST00000508039 487 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 AC008761.3-201ENST00000624803 892 ntBASIC18.76■□□□□ 0.59
HERVK_113Q902F9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERVK_113Q902F9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 MYCLP1-201ENST00000372451 1075 ntBASIC18.75■□□□□ 0.59
HERVK_113Q902F9 AC107890.1-201ENST00000422478 521 ntBASIC18.75■□□□□ 0.59
HERVK_113Q902F9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 LINC02560-201ENST00000596379 459 ntBASIC18.75■□□□□ 0.59
HERVK_113Q902F9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 AC100803.2-201ENST00000562459 1963 ntBASIC18.75■□□□□ 0.59
HERVK_113Q902F9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERVK_113Q902F9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.74■□□□□ 0.59
HERVK_113Q902F9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 GPS2P2-201ENST00000430745 888 ntBASIC18.74■□□□□ 0.59
HERVK_113Q902F9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.74■□□□□ 0.59
HERVK_113Q902F9 AC243562.1-201ENST00000560672 389 ntBASIC18.74■□□□□ 0.59
HERVK_113Q902F9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms