Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 AP002414.4-201ENST00000589764 1148 ntBASIC18.08■□□□□ 0.48
SCG3Q8WXD2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 AC099343.3-201ENST00000605834 2503 ntBASIC18.07■□□□□ 0.48
SCG3Q8WXD2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 AC090616.6-201ENST00000582640 721 ntBASIC18.07■□□□□ 0.48
SCG3Q8WXD2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCG3Q8WXD2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AL121894.2-201ENST00000602977 491 ntBASIC18.06■□□□□ 0.48
SCG3Q8WXD2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 AD000864.1-201ENST00000624076 2295 ntBASIC18.06■□□□□ 0.48
SCG3Q8WXD2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCG3Q8WXD2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC008894.3-201ENST00000624324 3103 ntBASIC18.05■□□□□ 0.48
SCG3Q8WXD2 Z83836.1-201ENST00000624605 1642 ntBASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms