Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 AP001269.4-201ENST00000609611 512 ntBASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 ZNF259P1-201ENST00000407656 1365 ntBASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEPDC1BQ8WUY9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.66■□□□□ 0.58
DEPDC1BQ8WUY9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 RPL13AP23-201ENST00000480739 586 ntBASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 AL049840.3-201ENST00000602669 611 ntBASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PMS2P7-201ENST00000506558 1336 ntBASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
DEPDC1BQ8WUY9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DEPDC1BQ8WUY9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
DEPDC1BQ8WUY9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.64■□□□□ 0.58
DEPDC1BQ8WUY9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DEPDC1BQ8WUY9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms