Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRUNE2Q8WUY3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRUNE2Q8WUY3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRUNE2Q8WUY3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 MYCLP1-201ENST00000372451 1075 ntBASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 TMEM14DP-201ENST00000422205 345 ntBASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 RAB43P1-201ENST00000561790 589 ntBASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 COX11-210ENST00000639671 696 ntBASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 AL133338.1-201ENST00000565695 1517 ntBASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRUNE2Q8WUY3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 AL512638.1-201ENST00000457493 794 ntBASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 IGHV3-42-201ENST00000520410 361 ntBASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 MIR4259-201ENST00000584466 101 ntBASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.18■□□□□ 0.5
PRUNE2Q8WUY3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 AL161938.1-201ENST00000569833 2180 ntBASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 AC003101.2-201ENST00000612557 442 ntBASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 AL671277.1-201ENST00000429656 993 ntBASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.17■□□□□ 0.5
PRUNE2Q8WUY3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.16■□□□□ 0.5
PRUNE2Q8WUY3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRUNE2Q8WUY3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRUNE2Q8WUY3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.16■□□□□ 0.5
PRUNE2Q8WUY3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRUNE2Q8WUY3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms