Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 AL022326.1-202ENST00000641533 845 ntBASIC17.72■□□□□ 0.43
CHD5Q8TDI0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHD5Q8TDI0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.71■□□□□ 0.43
CHD5Q8TDI0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 AC016396.2-201ENST00000562575 1417 ntBASIC17.71■□□□□ 0.43
CHD5Q8TDI0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 AP002414.1-201ENST00000391405 1147 ntBASIC17.71■□□□□ 0.43
CHD5Q8TDI0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD5Q8TDI0 GPR89P-201ENST00000407924 1495 ntBASIC17.71■□□□□ 0.43
CHD5Q8TDI0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.71■□□□□ 0.42
CHD5Q8TDI0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 AL356488.2-201ENST00000602755 427 ntBASIC17.7■□□□□ 0.42
CHD5Q8TDI0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHD5Q8TDI0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 CROCCP2-202ENST00000412962 2773 ntBASIC17.69■□□□□ 0.42
CHD5Q8TDI0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD5Q8TDI0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms