Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 AL391807.1-203ENST00000604392 2365 ntBASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 PVRIG2P-201ENST00000435460 978 ntBASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 AL136038.4-201ENST00000603606 1261 ntBASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 LINC01126-201ENST00000623515 1646 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AP001094.4-201ENST00000579008 2176 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AC022211.2-201ENST00000585075 2527 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 FAM8A6P-201ENST00000407496 1135 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 NTF6B-201ENST00000591913 560 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 AC018695.7-201ENST00000624587 2492 ntBASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP61Q8NHU2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP61Q8NHU2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms