Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 AC067852.2-201ENST00000590513 2313 ntBASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 KRT16P4-201ENST00000453883 522 ntBASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 AL121772.3-201ENST00000610840 674 ntBASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC148Q8NFR7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 AC111152.3-201ENST00000569699 673 ntBASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 AC019129.2-201ENST00000609837 1235 ntBASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC148Q8NFR7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms