Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC155Q8N6L0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
CCDC155Q8N6L0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AC138028.4-201ENST00000564984 1845 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 BX842568.4-201ENST00000421222 227 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 MTCL1P1-201ENST00000446207 792 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AC011467.2-201ENST00000598425 242 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AL138831.2-201ENST00000606564 490 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 AP001269.4-201ENST00000609611 512 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 INTS4P1-201ENST00000438455 1935 ntBASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC155Q8N6L0 LINC01126-201ENST00000623515 1646 ntBASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 AL049840.3-201ENST00000602669 611 ntBASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 OR6D1P-202ENST00000641007 5290 ntBASIC19.94■□□□□ 0.78
CCDC155Q8N6L0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms