Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.99■□□□□ 0.47
SIX5Q8N196 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.99■□□□□ 0.47
SIX5Q8N196 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC074386.1-202ENST00000463561 864 ntBASIC17.99■□□□□ 0.47
SIX5Q8N196 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC025678.2-201ENST00000562061 970 ntBASIC17.99■□□□□ 0.47
SIX5Q8N196 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC091812.2-201ENST00000619081 385 ntBASIC17.99■□□□□ 0.47
SIX5Q8N196 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIX5Q8N196 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SIX5Q8N196 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.99■□□□□ 0.47
SIX5Q8N196 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SIX5Q8N196 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SIX5Q8N196 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.98■□□□□ 0.47
SIX5Q8N196 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.98■□□□□ 0.47
SIX5Q8N196 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.98■□□□□ 0.47
SIX5Q8N196 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.98■□□□□ 0.47
SIX5Q8N196 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.98■□□□□ 0.47
SIX5Q8N196 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.98■□□□□ 0.47
SIX5Q8N196 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
SIX5Q8N196 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.98■□□□□ 0.47
SIX5Q8N196 AC005498.2-205ENST00000593218 784 ntBASIC17.98■□□□□ 0.47
SIX5Q8N196 AL513210.1-201ENST00000629608 234 ntBASIC17.98■□□□□ 0.47
SIX5Q8N196 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SIX5Q8N196 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SIX5Q8N196 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.98■□□□□ 0.47
SIX5Q8N196 AC025580.3-201ENST00000617932 1424 ntBASIC17.98■□□□□ 0.47
SIX5Q8N196 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIX5Q8N196 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.97■□□□□ 0.47
SIX5Q8N196 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 AC132938.5-201ENST00000624980 1813 ntBASIC17.97■□□□□ 0.47
SIX5Q8N196 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.97■□□□□ 0.47
SIX5Q8N196 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SIX5Q8N196 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIX5Q8N196 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms