Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 AC096633.1-201ENST00000422446 749 ntBASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 AF238378.1-201ENST00000526806 358 ntBASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM48Q8IWZ4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 RBM17P3-201ENST00000417687 1192 ntBASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 MTDHP3-201ENST00000594186 672 ntBASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 AC064862.7-201ENST00000604520 867 ntBASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 AC012313.1-201ENST00000593393 3059 ntBASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM48Q8IWZ4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 SCARNA2-201ENST00000458748 420 ntBASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 AP002469.2-201ENST00000531724 424 ntBASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 AL390961.4-201ENST00000623958 2535 ntBASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TRIM48Q8IWZ4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms