Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 RCN1P2-201ENST00000398357 915 ntBASIC16.84■□□□□ 0.29
RAB43Q86YS6 AP000347.1-202ENST00000435868 847 ntBASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC132008.2-207ENST00000454517 770 ntBASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC120114.3-201ENST00000611923 658 ntBASIC16.84■□□□□ 0.29
RAB43Q86YS6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB43Q86YS6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB43Q86YS6 AC099343.3-201ENST00000605834 2503 ntBASIC16.84■□□□□ 0.29
RAB43Q86YS6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB43Q86YS6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB43Q86YS6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB43Q86YS6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB43Q86YS6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB43Q86YS6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 HLA-A-201ENST00000376802 1334 ntBASIC16.83■□□□□ 0.28
RAB43Q86YS6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 RBM17P3-201ENST00000417687 1192 ntBASIC16.83■□□□□ 0.28
RAB43Q86YS6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 KRT18P67-201ENST00000432816 1264 ntBASIC16.83■□□□□ 0.28
RAB43Q86YS6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 AC093909.1-201ENST00000504731 1122 ntBASIC16.83■□□□□ 0.28
RAB43Q86YS6 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 TP73-AS1-207ENST00000624167 988 ntBASIC16.83■□□□□ 0.28
RAB43Q86YS6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB43Q86YS6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB43Q86YS6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.82■□□□□ 0.28
RAB43Q86YS6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB43Q86YS6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RAB43Q86YS6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms