Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 GPS2P2-201ENST00000430745 888 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 REXO1L3P-201ENST00000622202 1288 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 TUBB3P1-201ENST00000405796 1332 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AC067863.1-201ENST00000494933 530 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 DUTP2-201ENST00000519164 463 ntBASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13BQ7Z7G8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 FAM58CP-201ENST00000435741 640 ntBASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 KRT8P48-201ENST00000515599 1220 ntBASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VPS13BQ7Z7G8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms