Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 AL020996.1-203ENST00000536896 2307 ntBASIC21.33■■□□□ 1.01
TMC4Q7Z404 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMC4Q7Z404 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMC4Q7Z404 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMC4Q7Z404 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.33■■□□□ 1.01
TMC4Q7Z404 AC105339.1-204ENST00000636249 355 ntBASIC21.33■■□□□ 1.01
TMC4Q7Z404 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TMC4Q7Z404 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.33■■□□□ 1
TMC4Q7Z404 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TMC4Q7Z404 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.33■■□□□ 1
TMC4Q7Z404 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMC4Q7Z404 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.32■■□□□ 1
TMC4Q7Z404 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TMC4Q7Z404 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.32■■□□□ 1
TMC4Q7Z404 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMC4Q7Z404 MIR770-201ENST00000390219 98 ntBASIC21.32■■□□□ 1
TMC4Q7Z404 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
TMC4Q7Z404 PAWRP1-201ENST00000451083 565 ntBASIC21.32■■□□□ 1
TMC4Q7Z404 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.32■■□□□ 1
TMC4Q7Z404 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.32■■□□□ 1
TMC4Q7Z404 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.32■■□□□ 1
TMC4Q7Z404 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMC4Q7Z404 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMC4Q7Z404 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMC4Q7Z404 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TMC4Q7Z404 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TMC4Q7Z404 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.32■■□□□ 1
TMC4Q7Z404 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TMC4Q7Z404 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 FLJ13224-201ENST00000313737 1514 ntBASIC21.31■■□□□ 1
TMC4Q7Z404 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.31■■□□□ 1
TMC4Q7Z404 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TMC4Q7Z404 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
TMC4Q7Z404 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.31■■□□□ 1
TMC4Q7Z404 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.31■■□□□ 1
TMC4Q7Z404 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TMC4Q7Z404 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.31■■□□□ 1
TMC4Q7Z404 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.31■■□□□ 1
TMC4Q7Z404 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMC4Q7Z404 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TMC4Q7Z404 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TMC4Q7Z404 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.3■■□□□ 1
TMC4Q7Z404 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.3■■□□□ 1
TMC4Q7Z404 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.3■■□□□ 1
TMC4Q7Z404 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TMC4Q7Z404 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.3■■□□□ 1
TMC4Q7Z404 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.3■■□□□ 1
TMC4Q7Z404 AC112191.1-201ENST00000523689 701 ntBASIC21.3■■□□□ 1
TMC4Q7Z404 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.3■■□□□ 1
TMC4Q7Z404 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.3■■□□□ 1
TMC4Q7Z404 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.3■■□□□ 1
TMC4Q7Z404 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.3■■□□□ 1
TMC4Q7Z404 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.3■■□□□ 1
TMC4Q7Z404 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.3■■□□□ 1
TMC4Q7Z404 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.3■■□□□ 1
TMC4Q7Z404 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.3■■□□□ 1
TMC4Q7Z404 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.3■■□□□ 1
TMC4Q7Z404 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMC4Q7Z404 AC129492.6-201ENST00000611383 1305 ntBASIC21.29■■□□□ 1
TMC4Q7Z404 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms