Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AL845331.1-201ENST00000424978 1190 ntBASIC16.54■□□□□ 0.24
RTL4Q6ZR62 IGHV3-47-201ENST00000425060 335 ntBASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 MTCL1P1-201ENST00000446207 792 ntBASIC16.54■□□□□ 0.24
RTL4Q6ZR62 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 NSUN5P1-202ENST00000421140 1535 ntBASIC16.54■□□□□ 0.24
RTL4Q6ZR62 NSUN5P2-203ENST00000457352 1529 ntBASIC16.54■□□□□ 0.24
RTL4Q6ZR62 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL4Q6ZR62 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 FOSL1P1-201ENST00000511041 816 ntBASIC16.53■□□□□ 0.24
RTL4Q6ZR62 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 AC111152.3-201ENST00000569699 673 ntBASIC16.53■□□□□ 0.24
RTL4Q6ZR62 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 LINC01711-201ENST00000598340 967 ntBASIC16.53■□□□□ 0.24
RTL4Q6ZR62 AC138894.3-201ENST00000603787 634 ntBASIC16.53■□□□□ 0.24
RTL4Q6ZR62 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL4Q6ZR62 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 TSPY19P-201ENST00000418461 509 ntBASIC16.52■□□□□ 0.24
RTL4Q6ZR62 TSPY18P-201ENST00000441642 509 ntBASIC16.52■□□□□ 0.24
RTL4Q6ZR62 AC091607.1-201ENST00000490318 1060 ntBASIC16.52■□□□□ 0.24
RTL4Q6ZR62 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 AC091304.2-201ENST00000564639 760 ntBASIC16.52■□□□□ 0.24
RTL4Q6ZR62 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 AP005901.3-202ENST00000581653 237 ntBASIC16.52■□□□□ 0.24
RTL4Q6ZR62 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTL4Q6ZR62 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 LINC00896-202ENST00000609602 2128 ntBASIC16.52■□□□□ 0.23
RTL4Q6ZR62 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms