Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 AC006449.5-201ENST00000610658 2098 ntBASIC13.34□□□□□ -0.27
MRPL54Q6P161 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
MRPL54Q6P161 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL54Q6P161 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MRPL54Q6P161 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
MRPL54Q6P161 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
MRPL54Q6P161 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.33□□□□□ -0.27
MRPL54Q6P161 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MRPL54Q6P161 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 AC009102.3-201ENST00000623118 1491 ntBASIC13.33□□□□□ -0.28
MRPL54Q6P161 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL54Q6P161 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL54Q6P161 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 AL161772.1-201ENST00000610494 4412 ntBASIC13.32□□□□□ -0.28
MRPL54Q6P161 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 AC120498.8-201ENST00000614275 531 ntBASIC13.32□□□□□ -0.28
MRPL54Q6P161 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 AL662844.4-201ENST00000606367 2838 ntBASIC13.32□□□□□ -0.28
MRPL54Q6P161 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
MRPL54Q6P161 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL54Q6P161 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms