Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 AP002414.3-201ENST00000589352 1468 ntBASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.58■□□□□ 0.73
SWSAP1Q6NVH7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 AC005104.2-201ENST00000427818 678 ntBASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 IGHV3-22-201ENST00000520721 359 ntBASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SWSAP1Q6NVH7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 AC098831.1-202ENST00000438821 336 ntBASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 AC006116.8-202ENST00000587620 1550 ntBASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 AC009336.1-201ENST00000608941 1553 ntBASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SWSAP1Q6NVH7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AC138932.1-201ENST00000534164 6830 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 MYCLP1-201ENST00000372451 1075 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 MIR574-201ENST00000385209 96 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AC106730.1-201ENST00000566722 1090 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AL671883.3-201ENST00000603274 991 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 AL589182.2-201ENST00000619332 1049 ntBASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.56■□□□□ 0.72
SWSAP1Q6NVH7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms