Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-BQ31612 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-BQ31612 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HLA-BQ31612 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-BQ31612 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HLA-BQ31612 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-BQ31612 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-BQ31612 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.99■□□□□ 0.31
HLA-BQ31612 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-BQ31612 REXO1L3P-201ENST00000622202 1288 ntBASIC16.99■□□□□ 0.31
HLA-BQ31612 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-BQ31612 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-BQ31612 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-BQ31612 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-BQ31612 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-BQ31612 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 AL035633.1-201ENST00000406139 838 ntBASIC16.98■□□□□ 0.31
HLA-BQ31612 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-BQ31612 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 HLA-J-203ENST00000494367 1087 ntBASIC16.98■□□□□ 0.31
HLA-BQ31612 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-BQ31612 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-BQ31612 AC025678.2-201ENST00000562061 970 ntBASIC16.98■□□□□ 0.31
HLA-BQ31612 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-BQ31612 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-BQ31612 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-BQ31612 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-BQ31612 AL590787.1-201ENST00000568856 1315 ntBASIC16.97■□□□□ 0.31
HLA-BQ31612 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-BQ31612 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HLA-BQ31612 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 ACTG1P4-201ENST00000425123 1122 ntBASIC16.97■□□□□ 0.31
HLA-BQ31612 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-BQ31612 FAM185BP-201ENST00000443595 716 ntBASIC16.97■□□□□ 0.31
HLA-BQ31612 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.97■□□□□ 0.31
HLA-BQ31612 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-BQ31612 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-BQ31612 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HLA-BQ31612 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-BQ31612 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-BQ31612 AL096865.1-201ENST00000606796 927 ntBASIC16.97■□□□□ 0.31
HLA-BQ31612 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-BQ31612 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-BQ31612 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-BQ31612 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-BQ31612 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-BQ31612 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-BQ31612 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-BQ31612 AL121761.2-201ENST00000598007 1648 ntBASIC16.96■□□□□ 0.31
HLA-BQ31612 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms