Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCR4P61073 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.07■□□□□ 0.16
CXCR4P61073 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCR4P61073 AC142381.4-202ENST00000563973 229 ntBASIC16.07■□□□□ 0.16
CXCR4P61073 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR4P61073 CR769767.2-201ENST00000622735 460 ntBASIC16.07■□□□□ 0.16
CXCR4P61073 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 LYSMD4-203ENST00000378904 2122 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 AL513523.2-202ENST00000427283 2040 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 LINC02012-201ENST00000608206 1725 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.06■□□□□ 0.16
CXCR4P61073 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CXCR4P61073 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.06■□□□□ 0.16
CXCR4P61073 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 AP005242.2-201ENST00000580065 1175 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 AC008687.5-201ENST00000593746 558 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.06■□□□□ 0.16
CXCR4P61073 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.06■□□□□ 0.16
CXCR4P61073 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 AC092068.3-201ENST00000587894 2016 ntBASIC16.06■□□□□ 0.16
CXCR4P61073 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXCR4P61073 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 AL596257.1-201ENST00000641463 2694 ntBASIC16.05■□□□□ 0.16
CXCR4P61073 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.05■□□□□ 0.16
CXCR4P61073 AC012618.2-201ENST00000428058 849 ntBASIC16.05■□□□□ 0.16
CXCR4P61073 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 AC104390.1-201ENST00000555663 520 ntBASIC16.05■□□□□ 0.16
CXCR4P61073 WWOX-216ENST00000569818 525 ntBASIC16.05■□□□□ 0.16
CXCR4P61073 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 AL049637.2-201ENST00000641778 930 ntBASIC16.05■□□□□ 0.16
CXCR4P61073 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CXCR4P61073 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CXCR4P61073 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXCR4P61073 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms