Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.76■□□□□ 0.11
CLRN1P58418 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.76■□□□□ 0.11
CLRN1P58418 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.76■□□□□ 0.11
CLRN1P58418 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.76■□□□□ 0.11
CLRN1P58418 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CLRN1P58418 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLRN1P58418 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLRN1P58418 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.76■□□□□ 0.11
CLRN1P58418 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.76■□□□□ 0.11
CLRN1P58418 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.75■□□□□ 0.11
CLRN1P58418 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
CLRN1P58418 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.75■□□□□ 0.11
CLRN1P58418 FAM86EP-206ENST00000510506 987 ntBASIC15.75■□□□□ 0.11
CLRN1P58418 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
CLRN1P58418 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.75■□□□□ 0.11
CLRN1P58418 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLRN1P58418 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLRN1P58418 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.75■□□□□ 0.11
CLRN1P58418 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLRN1P58418 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLRN1P58418 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 REXO1L11P-201ENST00000620964 1927 ntBASIC15.74■□□□□ 0.11
CLRN1P58418 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 VENTXP7-201ENST00000475503 772 ntBASIC15.74■□□□□ 0.11
CLRN1P58418 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.74■□□□□ 0.11
CLRN1P58418 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.74■□□□□ 0.11
CLRN1P58418 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLRN1P58418 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.74■□□□□ 0.11
CLRN1P58418 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLRN1P58418 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CLRN1P58418 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.74■□□□□ 0.11
CLRN1P58418 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLRN1P58418 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.73■□□□□ 0.11
CLRN1P58418 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms