Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RIPPLY3P57055 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIPPLY3P57055 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.58□□□□□ -0.08
RIPPLY3P57055 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RIPPLY3P57055 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 AC074386.1-202ENST00000463561 864 ntBASIC14.57□□□□□ -0.08
RIPPLY3P57055 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 AL390754.1-201ENST00000619088 582 ntBASIC14.57□□□□□ -0.08
RIPPLY3P57055 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 AC008894.3-201ENST00000624324 3103 ntBASIC14.57□□□□□ -0.08
RIPPLY3P57055 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.57□□□□□ -0.08
RIPPLY3P57055 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIPPLY3P57055 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AC112907.3-201ENST00000577781 2400 ntBASIC14.56□□□□□ -0.08
RIPPLY3P57055 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 MIR658-201ENST00000385210 100 ntBASIC14.56□□□□□ -0.08
RIPPLY3P57055 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ACA64.2-201ENST00000459014 129 ntBASIC14.56□□□□□ -0.08
RIPPLY3P57055 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AC009118.2-201ENST00000613275 655 ntBASIC14.56□□□□□ -0.08
RIPPLY3P57055 AC004877.2-201ENST00000623941 599 ntBASIC14.56□□□□□ -0.08
RIPPLY3P57055 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIPPLY3P57055 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.56□□□□□ -0.08
RIPPLY3P57055 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RIPPLY3P57055 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIPPLY3P57055 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms