Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
PAX9P55771 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.15□□□□□ -0.14
PAX9P55771 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.15□□□□□ -0.14
PAX9P55771 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.15□□□□□ -0.14
PAX9P55771 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.15□□□□□ -0.14
PAX9P55771 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 AC142381.4-202ENST00000563973 229 ntBASIC14.15□□□□□ -0.14
PAX9P55771 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.15□□□□□ -0.14
PAX9P55771 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PAX9P55771 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PAX9P55771 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.15□□□□□ -0.15
PAX9P55771 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
PAX9P55771 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 UBE2SP1-201ENST00000450587 669 ntBASIC14.14□□□□□ -0.15
PAX9P55771 AC113404.2-201ENST00000507884 177 ntBASIC14.14□□□□□ -0.15
PAX9P55771 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.14□□□□□ -0.15
PAX9P55771 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.14□□□□□ -0.15
PAX9P55771 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PAX9P55771 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PAX9P55771 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 KRT18P65-201ENST00000439811 1286 ntBASIC14.13□□□□□ -0.15
PAX9P55771 GCSHP5-201ENST00000443090 522 ntBASIC14.13□□□□□ -0.15
PAX9P55771 AC098590.1-201ENST00000468126 897 ntBASIC14.13□□□□□ -0.15
PAX9P55771 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.13□□□□□ -0.15
PAX9P55771 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
PAX9P55771 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.13□□□□□ -0.15
PAX9P55771 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PAX9P55771 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms