Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CDH8P55286 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDH8P55286 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH8P55286 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH8P55286 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 AC073592.5-201ENST00000624854 528 ntBASIC18.78■□□□□ 0.6
CDH8P55286 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDH8P55286 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CDH8P55286 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH8P55286 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 PCDHB18P-201ENST00000524813 2368 ntBASIC18.77■□□□□ 0.6
CDH8P55286 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDH8P55286 AC133963.1-201ENST00000504166 1679 ntBASIC18.77■□□□□ 0.6
CDH8P55286 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH8P55286 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH8P55286 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 AC008608.2-201ENST00000606089 416 ntBASIC18.77■□□□□ 0.6
CDH8P55286 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.77■□□□□ 0.6
CDH8P55286 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CDH8P55286 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH8P55286 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 HLA-J-201ENST00000462773 1622 ntBASIC18.77■□□□□ 0.6
CDH8P55286 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH8P55286 AC004817.3-201ENST00000602957 2129 ntBASIC18.77■□□□□ 0.6
CDH8P55286 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH8P55286 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH8P55286 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH8P55286 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH8P55286 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH8P55286 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH8P55286 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDH8P55286 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH8P55286 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH8P55286 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 LINC00896-202ENST00000609602 2128 ntBASIC18.76■□□□□ 0.59
CDH8P55286 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDH8P55286 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 AC004870.1-201ENST00000315132 882 ntBASIC18.76■□□□□ 0.59
CDH8P55286 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH8P55286 TPM4P1-201ENST00000436100 807 ntBASIC18.76■□□□□ 0.59
CDH8P55286 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH8P55286 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 AC002558.1-201ENST00000488906 803 ntBASIC18.76■□□□□ 0.59
CDH8P55286 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.76■□□□□ 0.59
CDH8P55286 IGHV3-52-201ENST00000519770 353 ntBASIC18.76■□□□□ 0.59
CDH8P55286 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH8P55286 AL031008.1-201ENST00000619963 541 ntBASIC18.76■□□□□ 0.59
CDH8P55286 AL355877.3-201ENST00000622820 899 ntBASIC18.76■□□□□ 0.59
CDH8P55286 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH8P55286 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms