Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 NKILA-202ENST00000614771 2598 ntBASIC19.37■□□□□ 0.69
PMS1P54277 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.36■□□□□ 0.69
PMS1P54277 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.36■□□□□ 0.69
PMS1P54277 FAM86EP-206ENST00000510506 987 ntBASIC19.36■□□□□ 0.69
PMS1P54277 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.36■□□□□ 0.69
PMS1P54277 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.36■□□□□ 0.69
PMS1P54277 NTF6B-201ENST00000591913 560 ntBASIC19.36■□□□□ 0.69
PMS1P54277 AL138831.2-201ENST00000606564 490 ntBASIC19.36■□□□□ 0.69
PMS1P54277 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 AC116353.5-201ENST00000638148 1699 ntBASIC19.36■□□□□ 0.69
PMS1P54277 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PMS1P54277 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PMS1P54277 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 AC060834.1-201ENST00000443027 2032 ntBASIC19.35■□□□□ 0.69
PMS1P54277 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
PMS1P54277 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PMS1P54277 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.35■□□□□ 0.69
PMS1P54277 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.35■□□□□ 0.69
PMS1P54277 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.35■□□□□ 0.69
PMS1P54277 KRT8P26-201ENST00000534154 1276 ntBASIC19.35■□□□□ 0.69
PMS1P54277 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PMS1P54277 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PMS1P54277 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PMS1P54277 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 AC002558.1-201ENST00000488906 803 ntBASIC19.34■□□□□ 0.69
PMS1P54277 AP005901.3-202ENST00000581653 237 ntBASIC19.34■□□□□ 0.69
PMS1P54277 IGHV3-41-201ENST00000613121 348 ntBASIC19.34■□□□□ 0.69
PMS1P54277 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PMS1P54277 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.34■□□□□ 0.69
PMS1P54277 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PMS1P54277 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms