Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.28■□□□□ 0.68
ACLYP53396 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.28■□□□□ 0.68
ACLYP53396 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.28■□□□□ 0.68
ACLYP53396 ACTL9-202ENST00000612068 1252 ntBASIC19.28■□□□□ 0.68
ACLYP53396 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.28■□□□□ 0.68
ACLYP53396 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
ACLYP53396 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.27■□□□□ 0.68
ACLYP53396 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.27■□□□□ 0.68
ACLYP53396 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACLYP53396 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.27■□□□□ 0.68
ACLYP53396 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.27■□□□□ 0.68
ACLYP53396 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ACLYP53396 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.27■□□□□ 0.68
ACLYP53396 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.27■□□□□ 0.68
ACLYP53396 AC093520.2-201ENST00000561830 333 ntBASIC19.27■□□□□ 0.68
ACLYP53396 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACLYP53396 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.27■□□□□ 0.68
ACLYP53396 MIR4745-201ENST00000577608 62 ntBASIC19.27■□□□□ 0.68
ACLYP53396 AC138761.1-201ENST00000584393 385 ntBASIC19.27■□□□□ 0.68
ACLYP53396 AC120498.9-201ENST00000339021 3867 ntBASIC19.27■□□□□ 0.68
ACLYP53396 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ACLYP53396 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.27■□□□□ 0.67
ACLYP53396 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.27■□□□□ 0.67
ACLYP53396 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACLYP53396 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.26■□□□□ 0.67
ACLYP53396 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ACLYP53396 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.26■□□□□ 0.67
ACLYP53396 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.26■□□□□ 0.67
ACLYP53396 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ACLYP53396 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ACLYP53396 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.26■□□□□ 0.67
ACLYP53396 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.26■□□□□ 0.67
ACLYP53396 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.26■□□□□ 0.67
ACLYP53396 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACLYP53396 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ACLYP53396 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.26■□□□□ 0.67
ACLYP53396 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ACLYP53396 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ACLYP53396 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.25■□□□□ 0.67
ACLYP53396 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 TIMM8BP1-201ENST00000452384 211 ntBASIC19.25■□□□□ 0.67
ACLYP53396 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.25■□□□□ 0.67
ACLYP53396 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
ACLYP53396 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms