Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PDX1P52945 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.1■□□□□ 0.33
PDX1P52945 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 UNC93B6-202ENST00000528242 690 ntBASIC17.1■□□□□ 0.33
PDX1P52945 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 AC105339.3-201ENST00000560043 636 ntBASIC17.1■□□□□ 0.33
PDX1P52945 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.1■□□□□ 0.33
PDX1P52945 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PDX1P52945 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PDX1P52945 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDX1P52945 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.09■□□□□ 0.33
PDX1P52945 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDX1P52945 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
PDX1P52945 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDX1P52945 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 LAGE3P1-201ENST00000425356 484 ntBASIC17.09■□□□□ 0.33
PDX1P52945 GPX1P2-201ENST00000429271 606 ntBASIC17.09■□□□□ 0.33
PDX1P52945 KRT18P3-201ENST00000451602 1288 ntBASIC17.09■□□□□ 0.33
PDX1P52945 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.09■□□□□ 0.33
PDX1P52945 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.09■□□□□ 0.33
PDX1P52945 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
PDX1P52945 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.09■□□□□ 0.33
PDX1P52945 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 AC010327.4-202ENST00000591484 748 ntBASIC17.09■□□□□ 0.33
PDX1P52945 AL691403.2-201ENST00000618460 490 ntBASIC17.09■□□□□ 0.33
PDX1P52945 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.09■□□□□ 0.33
PDX1P52945 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
PDX1P52945 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.09■□□□□ 0.33
PDX1P52945 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDX1P52945 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDX1P52945 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PDX1P52945 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDX1P52945 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.08■□□□□ 0.33
PDX1P52945 AL133373.2-201ENST00000623187 2828 ntBASIC17.08■□□□□ 0.33
PDX1P52945 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDX1P52945 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.08■□□□□ 0.33
PDX1P52945 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PDX1P52945 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.08■□□□□ 0.32
PDX1P52945 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 RPSAP43-201ENST00000402237 625 ntBASIC17.08■□□□□ 0.32
PDX1P52945 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 UPF3AP3-201ENST00000420996 769 ntBASIC17.08■□□□□ 0.32
PDX1P52945 BX005266.1-201ENST00000473402 457 ntBASIC17.08■□□□□ 0.32
PDX1P52945 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.08■□□□□ 0.32
PDX1P52945 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.08■□□□□ 0.32
PDX1P52945 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDX1P52945 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDX1P52945 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms