Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CX3CR1P49238 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CX3CR1P49238 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 AC106820.2-201ENST00000563775 3264 ntBASIC15.51■□□□□ 0.07
CX3CR1P49238 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.51■□□□□ 0.07
CX3CR1P49238 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CR1P49238 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.51■□□□□ 0.07
CX3CR1P49238 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.51■□□□□ 0.07
CX3CR1P49238 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.51■□□□□ 0.07
CX3CR1P49238 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CX3CR1P49238 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.5■□□□□ 0.07
CX3CR1P49238 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CX3CR1P49238 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CX3CR1P49238 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CR1P49238 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CR1P49238 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CR1P49238 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.49■□□□□ 0.07
CX3CR1P49238 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CR1P49238 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CR1P49238 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.49■□□□□ 0.07
CX3CR1P49238 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CR1P49238 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CR1P49238 AC005332.3-201ENST00000589904 676 ntBASIC15.49■□□□□ 0.07
CX3CR1P49238 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CR1P49238 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CR1P49238 AC084018.2-201ENST00000613093 2607 ntBASIC15.48■□□□□ 0.07
CX3CR1P49238 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.48■□□□□ 0.07
CX3CR1P49238 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CR1P49238 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CR1P49238 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms