Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PDE6BP35913 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
PDE6BP35913 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDE6BP35913 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE6BP35913 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE6BP35913 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.54■■□□□ 1.04
PDE6BP35913 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE6BP35913 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.54■■□□□ 1.04
PDE6BP35913 DUX4L27-201ENST00000554796 1261 ntBASIC21.54■■□□□ 1.04
PDE6BP35913 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PDE6BP35913 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6BP35913 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6BP35913 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE6BP35913 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 AL355306.1-201ENST00000415580 579 ntBASIC21.53■■□□□ 1.04
PDE6BP35913 AL671277.1-201ENST00000429656 993 ntBASIC21.53■■□□□ 1.04
PDE6BP35913 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE6BP35913 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE6BP35913 AC093214.1-201ENST00000511688 1107 ntBASIC21.53■■□□□ 1.04
PDE6BP35913 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE6BP35913 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE6BP35913 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE6BP35913 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDE6BP35913 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6BP35913 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6BP35913 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PDE6BP35913 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE6BP35913 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PDE6BP35913 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE6BP35913 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 AC005237.2-201ENST00000434368 219 ntBASIC21.52■■□□□ 1.04
PDE6BP35913 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.52■■□□□ 1.04
PDE6BP35913 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE6BP35913 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.52■■□□□ 1.04
PDE6BP35913 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PDE6BP35913 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PDE6BP35913 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
PDE6BP35913 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE6BP35913 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE6BP35913 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms