Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 AL023284.2-201ENST00000405850 579 ntBASIC12.99□□□□□ -0.33
CKS2P33552 AC004980.1-204ENST00000429707 299 ntBASIC12.99□□□□□ -0.33
CKS2P33552 AC083906.2-201ENST00000511578 360 ntBASIC12.99□□□□□ -0.33
CKS2P33552 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CKS2P33552 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.99□□□□□ -0.33
CKS2P33552 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.99□□□□□ -0.33
CKS2P33552 LINC01451-201ENST00000623792 534 ntBASIC12.99□□□□□ -0.33
CKS2P33552 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.99□□□□□ -0.33
CKS2P33552 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 AC100803.2-201ENST00000562459 1963 ntBASIC12.99□□□□□ -0.33
CKS2P33552 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.99□□□□□ -0.33
CKS2P33552 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.99□□□□□ -0.33
CKS2P33552 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 AC079328.2-201ENST00000561241 3354 ntBASIC12.98□□□□□ -0.33
CKS2P33552 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
CKS2P33552 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.98□□□□□ -0.33
CKS2P33552 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.98□□□□□ -0.33
CKS2P33552 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 AC073111.5-205ENST00000641717 521 ntBASIC12.98□□□□□ -0.33
CKS2P33552 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 LINC02199-201ENST00000506655 2702 ntBASIC12.98□□□□□ -0.33
CKS2P33552 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CKS2P33552 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CKS2P33552 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.98□□□□□ -0.33
CKS2P33552 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CKS2P33552 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.97□□□□□ -0.33
CKS2P33552 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.97□□□□□ -0.33
CKS2P33552 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.97□□□□□ -0.33
CKS2P33552 AC026185.1-201ENST00000445748 174 ntBASIC12.97□□□□□ -0.33
CKS2P33552 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CKS2P33552 AC009065.1-201ENST00000564055 1225 ntBASIC12.97□□□□□ -0.33
CKS2P33552 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms