Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 PHGDH-209ENST00000641074 1780 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
CCKBRP32239 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.9■□□□□ 0.3
CCKBRP32239 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.9■□□□□ 0.3
CCKBRP32239 AL020989.1-201ENST00000422979 469 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.9■□□□□ 0.3
CCKBRP32239 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.9■□□□□ 0.3
CCKBRP32239 AC004967.1-201ENST00000453589 447 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.9■□□□□ 0.3
CCKBRP32239 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.9■□□□□ 0.3
CCKBRP32239 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.9■□□□□ 0.3
CCKBRP32239 AP001160.2-201ENST00000596071 487 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 MTDHP5-201ENST00000598980 586 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 AC064836.3-201ENST00000607928 673 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 AL353593.2-201ENST00000602529 1483 ntBASIC16.9■□□□□ 0.3
CCKBRP32239 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCKBRP32239 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCKBRP32239 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.9■□□□□ 0.3
CCKBRP32239 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.89■□□□□ 0.3
CCKBRP32239 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCKBRP32239 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCKBRP32239 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCKBRP32239 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCKBRP32239 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.89■□□□□ 0.3
CCKBRP32239 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCKBRP32239 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCKBRP32239 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCKBRP32239 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 AC004817.3-201ENST00000602957 2129 ntBASIC16.89■□□□□ 0.29
CCKBRP32239 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCKBRP32239 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.89■□□□□ 0.29
CCKBRP32239 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CCKBRP32239 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCKBRP32239 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 AC126763.1-201ENST00000552015 2118 ntBASIC16.88■□□□□ 0.29
CCKBRP32239 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.88■□□□□ 0.29
CCKBRP32239 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CCKBRP32239 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCKBRP32239 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
CCKBRP32239 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.88■□□□□ 0.29
CCKBRP32239 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms