Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA13P31271 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HOXA13P31271 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA13P31271 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXA13P31271 AC003669.1-201ENST00000334569 611 ntBASIC20.03■□□□□ 0.8
HOXA13P31271 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HOXA13P31271 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXA13P31271 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA13P31271 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXA13P31271 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXA13P31271 AL671883.3-201ENST00000603274 991 ntBASIC20.03■□□□□ 0.8
HOXA13P31271 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA13P31271 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA13P31271 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA13P31271 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA13P31271 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HOXA13P31271 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HOXA13P31271 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA13P31271 AC018470.1-201ENST00000624790 3129 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA13P31271 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HOXA13P31271 AC098831.1-202ENST00000438821 336 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 PRYP5-201ENST00000451909 266 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA13P31271 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.02■□□□□ 0.8
HOXA13P31271 RPL13AP23-201ENST00000480739 586 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 AC002558.1-201ENST00000488906 803 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 STK19B-204ENST00000512515 211 ntBASIC20.02■□□□□ 0.8
HOXA13P31271 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA13P31271 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXA13P31271 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HOXA13P31271 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA13P31271 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
HOXA13P31271 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA13P31271 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXA13P31271 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXA13P31271 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HOXA13P31271 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXA13P31271 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXA13P31271 AC006116.8-202ENST00000587620 1550 ntBASIC20.01■□□□□ 0.79
HOXA13P31271 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HOXA13P31271 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXA13P31271 LAGE3P1-201ENST00000425356 484 ntBASIC20.01■□□□□ 0.79
HOXA13P31271 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXA13P31271 AC105339.3-201ENST00000560043 636 ntBASIC20.01■□□□□ 0.79
HOXA13P31271 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXA13P31271 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXA13P31271 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA13P31271 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXA13P31271 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXA13P31271 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXA13P31271 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXA13P31271 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXA13P31271 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms