Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA11P31270 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 KRT18P13-201ENST00000400056 1290 ntBASIC18.97■□□□□ 0.63
HOXA11P31270 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.97■□□□□ 0.63
HOXA11P31270 KRT18P2-201ENST00000447938 1258 ntBASIC18.97■□□□□ 0.63
HOXA11P31270 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXA11P31270 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
HOXA11P31270 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXA11P31270 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HOXA11P31270 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA11P31270 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA11P31270 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HOXA11P31270 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 PTCHD3P3-201ENST00000403073 906 ntBASIC18.96■□□□□ 0.63
HOXA11P31270 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXA11P31270 AC108073.2-201ENST00000464002 357 ntBASIC18.96■□□□□ 0.63
HOXA11P31270 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.96■□□□□ 0.63
HOXA11P31270 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXA11P31270 AC139530.3-201ENST00000620344 690 ntBASIC18.96■□□□□ 0.63
HOXA11P31270 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HOXA11P31270 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA11P31270 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA11P31270 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 AL390961.4-201ENST00000623958 2535 ntBASIC18.96■□□□□ 0.63
HOXA11P31270 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA11P31270 AC046185.3-201ENST00000623228 1824 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 AL135999.2-201ENST00000622438 1686 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HOXA11P31270 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXA11P31270 BX842568.4-201ENST00000421222 227 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXA11P31270 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
HOXA11P31270 AC092865.5-201ENST00000545435 363 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXA11P31270 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA11P31270 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXA11P31270 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.95■□□□□ 0.62
HOXA11P31270 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXA11P31270 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXA11P31270 AL139327.4-201ENST00000612362 153 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXA11P31270 AL805961.1-202ENST00000641562 540 ntBASIC18.95■□□□□ 0.62
HOXA11P31270 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HOXA11P31270 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HOXA11P31270 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HOXA11P31270 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA11P31270 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA11P31270 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXA11P31270 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.94■□□□□ 0.62
HOXA11P31270 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HOXA11P31270 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXA11P31270 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HOXA11P31270 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.94■□□□□ 0.62
HOXA11P31270 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXA11P31270 ACTG1P4-201ENST00000425123 1122 ntBASIC18.94■□□□□ 0.62
HOXA11P31270 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXA11P31270 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 AC064836.3-201ENST00000607928 673 ntBASIC18.94■□□□□ 0.62
HOXA11P31270 AC004790.2-201ENST00000623588 572 ntBASIC18.94■□□□□ 0.62
HOXA11P31270 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXA11P31270 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXA11P31270 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HOXA11P31270 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HOXA11P31270 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HOXA11P31270 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms