Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.69■□□□□ 0.42
SRFP11831 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFP11831 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFP11831 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFP11831 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFP11831 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFP11831 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 AC236430.1-201ENST00000402231 743 ntBASIC17.69■□□□□ 0.42
SRFP11831 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFP11831 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFP11831 AC140658.5-201ENST00000438532 169 ntBASIC17.69■□□□□ 0.42
SRFP11831 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFP11831 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFP11831 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFP11831 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.69■□□□□ 0.42
SRFP11831 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFP11831 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFP11831 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFP11831 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SRFP11831 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 MIR943-201ENST00000401286 94 ntBASIC17.68■□□□□ 0.42
SRFP11831 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFP11831 KRT18P32-201ENST00000424695 1287 ntBASIC17.68■□□□□ 0.42
SRFP11831 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 AC002472.2-201ENST00000442739 958 ntBASIC17.68■□□□□ 0.42
SRFP11831 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 AP001059.3-201ENST00000619053 235 ntBASIC17.68■□□□□ 0.42
SRFP11831 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 AL645728.2-201ENST00000641974 660 ntBASIC17.68■□□□□ 0.42
SRFP11831 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.68■□□□□ 0.42
SRFP11831 TUBB3P1-201ENST00000405796 1332 ntBASIC17.68■□□□□ 0.42
SRFP11831 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFP11831 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRFP11831 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SRFP11831 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 TSPY16P-201ENST00000449843 468 ntBASIC17.67■□□□□ 0.42
SRFP11831 KLF2P3-201ENST00000451977 1087 ntBASIC17.67■□□□□ 0.42
SRFP11831 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 AC079140.1-201ENST00000508039 487 ntBASIC17.67■□□□□ 0.42
SRFP11831 AC005225.4-201ENST00000557330 545 ntBASIC17.67■□□□□ 0.42
SRFP11831 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.67■□□□□ 0.42
SRFP11831 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFP11831 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFP11831 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFP11831 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFP11831 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFP11831 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFP11831 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.66■□□□□ 0.42
SRFP11831 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFP11831 TFAMP1-201ENST00000412727 736 ntBASIC17.66■□□□□ 0.42
SRFP11831 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.66■□□□□ 0.42
SRFP11831 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRFP11831 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms