Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RARBP10826 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
RARBP10826 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RARBP10826 AP002414.1-201ENST00000391405 1147 ntBASIC19.65■□□□□ 0.74
RARBP10826 PTCHD3P3-201ENST00000403073 906 ntBASIC19.65■□□□□ 0.74
RARBP10826 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
RARBP10826 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.65■□□□□ 0.74
RARBP10826 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.65■□□□□ 0.74
RARBP10826 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 AC011467.4-201ENST00000594891 528 ntBASIC19.65■□□□□ 0.74
RARBP10826 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.65■□□□□ 0.74
RARBP10826 LETM1P2-201ENST00000597330 2178 ntBASIC19.65■□□□□ 0.74
RARBP10826 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RARBP10826 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.65■□□□□ 0.74
RARBP10826 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
RARBP10826 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RARBP10826 AL031598.1-201ENST00000561511 1773 ntBASIC19.65■□□□□ 0.74
RARBP10826 AC097637.2-201ENST00000624096 1997 ntBASIC19.64■□□□□ 0.74
RARBP10826 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RARBP10826 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.64■□□□□ 0.74
RARBP10826 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.64■□□□□ 0.74
RARBP10826 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RARBP10826 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RARBP10826 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RARBP10826 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.64■□□□□ 0.73
RARBP10826 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 FAM58CP-201ENST00000435741 640 ntBASIC19.64■□□□□ 0.73
RARBP10826 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.64■□□□□ 0.73
RARBP10826 AP000344.2-201ENST00000512987 629 ntBASIC19.64■□□□□ 0.73
RARBP10826 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.64■□□□□ 0.73
RARBP10826 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RARBP10826 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.64■□□□□ 0.73
RARBP10826 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.64■□□□□ 0.73
RARBP10826 STK25P1-201ENST00000585406 838 ntBASIC19.64■□□□□ 0.73
RARBP10826 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.64■□□□□ 0.73
RARBP10826 AC116407.2-201ENST00000613639 860 ntBASIC19.64■□□□□ 0.73
RARBP10826 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.64■□□□□ 0.73
RARBP10826 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RARBP10826 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RARBP10826 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.63■□□□□ 0.73
RARBP10826 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RARBP10826 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RARBP10826 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 TSEN15P1-201ENST00000423257 515 ntBASIC19.63■□□□□ 0.73
RARBP10826 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 RHOQP3-201ENST00000437982 621 ntBASIC19.63■□□□□ 0.73
RARBP10826 AC074386.1-202ENST00000463561 864 ntBASIC19.63■□□□□ 0.73
RARBP10826 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RARBP10826 IGHV3-52-201ENST00000519770 353 ntBASIC19.63■□□□□ 0.73
RARBP10826 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.63■□□□□ 0.73
RARBP10826 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.63■□□□□ 0.73
RARBP10826 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.63■□□□□ 0.73
RARBP10826 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 AC007064.4-201ENST00000637740 555 ntBASIC19.63■□□□□ 0.73
RARBP10826 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARBP10826 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.62■□□□□ 0.73
RARBP10826 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RARBP10826 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms