Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.49■□□□□ 0.07
UBCP0CG48 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.49■□□□□ 0.07
UBCP0CG48 LINC01568-207ENST00000641790 1380 ntBASIC15.49■□□□□ 0.07
UBCP0CG48 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBCP0CG48 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
UBCP0CG48 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.48■□□□□ 0.07
UBCP0CG48 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
UBCP0CG48 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 TSPY15P-201ENST00000457163 923 ntBASIC15.48■□□□□ 0.07
UBCP0CG48 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 GCSHP2-201ENST00000560971 527 ntBASIC15.48■□□□□ 0.07
UBCP0CG48 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 AC009154.2-201ENST00000621177 724 ntBASIC15.48■□□□□ 0.07
UBCP0CG48 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
UBCP0CG48 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
UBCP0CG48 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.48■□□□□ 0.07
UBCP0CG48 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.48■□□□□ 0.07
UBCP0CG48 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UBCP0CG48 BX276092.7-203ENST00000637198 1536 ntBASIC15.48■□□□□ 0.07
UBCP0CG48 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
UBCP0CG48 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 AC011676.5-201ENST00000624864 2660 ntBASIC15.47■□□□□ 0.07
UBCP0CG48 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.47■□□□□ 0.07
UBCP0CG48 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
UBCP0CG48 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.47■□□□□ 0.07
UBCP0CG48 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.47■□□□□ 0.07
UBCP0CG48 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.47■□□□□ 0.07
UBCP0CG48 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
UBCP0CG48 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UBCP0CG48 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.46■□□□□ 0.07
UBCP0CG48 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UBCP0CG48 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UBCP0CG48 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms