Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC009118.2-201ENST00000613275 655 ntBASIC17.2■□□□□ 0.34
SP9P0CG40 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SP9P0CG40 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SP9P0CG40 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SP9P0CG40 ANO7L1-203ENST00000602586 1720 ntBASIC17.19■□□□□ 0.34
SP9P0CG40 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SP9P0CG40 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SP9P0CG40 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SP9P0CG40 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 AC092580.3-201ENST00000430932 139 ntBASIC17.19■□□□□ 0.34
SP9P0CG40 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 AC004890.2-204ENST00000481968 304 ntBASIC17.19■□□□□ 0.34
SP9P0CG40 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.19■□□□□ 0.34
SP9P0CG40 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.19■□□□□ 0.34
SP9P0CG40 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 MIR6799-201ENST00000620297 69 ntBASIC17.19■□□□□ 0.34
SP9P0CG40 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
SP9P0CG40 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SP9P0CG40 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.19■□□□□ 0.34
SP9P0CG40 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.19■□□□□ 0.34
SP9P0CG40 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.19■□□□□ 0.34
SP9P0CG40 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SP9P0CG40 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.18■□□□□ 0.34
SP9P0CG40 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SP9P0CG40 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.18■□□□□ 0.34
SP9P0CG40 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 AC241585.1-201ENST00000433527 519 ntBASIC17.18■□□□□ 0.34
SP9P0CG40 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.18■□□□□ 0.34
SP9P0CG40 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.18■□□□□ 0.34
SP9P0CG40 AC116407.2-201ENST00000613639 860 ntBASIC17.18■□□□□ 0.34
SP9P0CG40 MIR6080-201ENST00000617359 66 ntBASIC17.18■□□□□ 0.34
SP9P0CG40 AL161645.1-201ENST00000622716 1255 ntBASIC17.18■□□□□ 0.34
SP9P0CG40 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
SP9P0CG40 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SP9P0CG40 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SP9P0CG40 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.17■□□□□ 0.34
SP9P0CG40 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 MYCLP1-201ENST00000372451 1075 ntBASIC17.17■□□□□ 0.34
SP9P0CG40 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 MRPS18AP1-201ENST00000414458 589 ntBASIC17.17■□□□□ 0.34
SP9P0CG40 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.17■□□□□ 0.34
SP9P0CG40 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 AC087163.2-201ENST00000457299 853 ntBASIC17.17■□□□□ 0.34
SP9P0CG40 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.17■□□□□ 0.34
SP9P0CG40 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.17■□□□□ 0.34
SP9P0CG40 AC002558.1-201ENST00000488906 803 ntBASIC17.17■□□□□ 0.34
SP9P0CG40 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.17■□□□□ 0.34
SP9P0CG40 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SP9P0CG40 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SP9P0CG40 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.17■□□□□ 0.34
SP9P0CG40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
SP9P0CG40 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms